BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025F02LP1|AL428411
(897 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1752 0.0
>3x_Contig1721
Length = 17834
Score = 1752 bits (882), Expect = 0.0
Identities = 894/898 (99%), Gaps = 1/898 (0%)
Strand = Plus / Plus
Query: 1 gatcagcaactagagctgcaacaccagkagaaatagtgtggatgaatttttatgtgactt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2405 gatcagcaactagagctgcaacaccagaagaaatagtgtggatgaatttttatgtgactt 2464
Query: 61 cttaatttttgagaagttaacggcagcatgtgatgtaaaatccctgtatatattattatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 cttaatttttgagaagttaacggcagcatgtgatgtaaaatccctgtatatattattatt 2524
Query: 121 cgatctaaatggttctccttagtacgcatacaatgtctgtcgtttttcactgtactaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 cgatctaaatggttctccttagtacgcatacaatgtctgtcgtttttcactgtactaaac 2584
Query: 181 tcttccactttactatgtacatatagattgttatttagatatgttaattatcacatacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2585 tcttccactttactatgtacatatagattgttatttagatatgttaattatcacatacaa 2644
Query: 241 atcacatacaaatcacatacagagatagaaaagatattacatcgcagtatgccaaagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2645 atcacatacaaatcacatacagagatagaaaagatattacatcgcagtatgccaaagcat 2704
Query: 301 aatacttttgcctggragaaagaacatttaacagaacaaaaacgagaagaattagggaag 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2705 aatacttttgcctggaagaaagaacatttaacagaacaaaaacgagaagaattagggaag 2764
Query: 361 gatgtatttcatatttgatattatttcccttgctccaaaagacgatctacttttgcttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 gatgtatttcatatttgatattatttcccttgctccaaaagacgatctacttttgcttcc 2824
Query: 421 aaagcagcaagaatttcatctttgcgggtattttcctcggttaatttatcaatatagctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 aaagcagcaagaatttcatctttgcgggtattttcctcggttaatttatcaatatagctt 2884
Query: 481 tccaactttagaactaatccagataatgtttctacagattgtctcaaattgagagacttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 tccaactttagaactaatccagataatgtttctacagattgtctcaaattgagagacttg 2944
Query: 541 ttcgtagatgctccagctgctgctgctgctccagctgctgctgctgctccagctgcgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 ttcgtagatgctccagctgctgctgctgctccagctgctgctgctgctccagctgcgcca 3004
Query: 601 cctgtattcggattggaagatggcttttcttcgctgtcttcctgagaagggttcacacgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 cctgtattcggattggaagatggcttttcttcgctgtcttcctgagaagggttcacacgg 3064
Query: 661 atgtttgtttccacgctagcctgtgatgaagcttcgacctttgcctctggagtactttcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 atgtttgtttccacgctagcctgtgatgaagcttcgacctttgcctctggagtactttcg 3124
Query: 721 actttagaagaagctgaggccttcgaggtaatttctgtagacgaattttcttccttttgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3125 actttagaagaagctgaggccttcgaggtaatttctgtagacgaattttcttccttttgc 3184
Query: 781 tgtgg-amctcttcagcagccttgtcaggttcagaatcggtgttagcttccaccttcaca 839
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3185 tgtggaacctcttcagcagccttgtcaggttcagaatcggtgttagcttccaccttcaca 3244
Query: 840 acaacttctggttgttgtgatgctttcacgatcttttcatcctcagagtcccatactg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3245 acaacttctggttgttgtgatgctttcacgatcttttcatcctcagagtcccatactg 3302
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7870
Number of Sequences: 1807
Number of extensions: 7870
Number of successful extensions: 347
Number of sequences better than 1.0e-20: 1
length of query: 897
length of database: 10,358,551
effective HSP length: 16
effective length of query: 881
effective length of database: 10,329,639
effective search space: 9100411959
effective search space used: 9100411959
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)